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Reference index for {IFP}

Function/ClassDescription
allele.freq {IFP}Allele Frequency Computation from Genotype Data
allele.freq.G {IFP}Allele Frequency Computation from the sequencing data with a vcf type of the 1000 Genomes Project
apoe {IFP}Genetic data of APOE gene region
apoe7 {IFP}Genetic data of APOE gene region
apoeG {IFP}Sequencing data of APOE gene region from the 1000 Genomes Project
drgegggne {IFP}causal models with all possible causal factors: G, G*G, G*E and E
drgegne {IFP}causal models with three possible causal factors: G, G*E and E
drgen {IFP}causal models with G*E
drgene {IFP}causal models with G*E and E
drggn {IFP}causal models with G*G
drgn {IFP}causal models with G
error.rates {IFP}Error Rates Estimation for Likelihood Ratio Tests Designed for Identifying Number of Functional Polymorphisms
geno.freq {IFP}Genotype Frequency Computation from the sequencing data with a vcf type of the 1000 Genomes Project
genoC {IFP}Sequencing data of APOE gene region from the 1000 Genomes Project
genoT {IFP}Sequencing data of APOE gene region from the 1000 Genomes Project
genotype {IFP}Conversion to Genotypes from Alleles using the sequencing data with a vcf type of the 1000 Genomes Project
hap.freq {IFP}Estimation of Haplotype Frequencies with Two SNPs
iter.mcmc {IFP}mcmc inference of causal models with all possible causal factors: G, G*G, G*E and E
lrt {IFP}Likelihood Ratio Tests for Identifying Number of Functional Polymorphisms
lrtG {IFP}Likelihood Ratio Tests for Identifying Disease Polymorphisms with Same Effects