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yanomama {ade4}

Distance Matrices
Package: 
ade4
Version: 
1.5-2

Description

This data set gives 3 matrices about geographical, genetic and anthropometric distances.

Usage

data(yanomama)

References

Table 7.2 Distance matrices for 19 villages of Yanomama Indians. All distances are as given by Spielman (1973), multiplied by 100 for convenience in: Manly, B.F.J. (1991) Randomization and Monte Carlo methods in biology Chapman and Hall, London, 1--281.

Examples

data(yanomama)
    gen <- quasieuclid(as.dist(yanomama$gen)) # depends of mva
    ant <- quasieuclid(as.dist(yanomama$ant)) # depends of mva
    par(mfrow = c(2,2))
    plot(gen, ant)
    t1 <- mantel.randtest(gen, ant, 99);
    plot(t1, main = "gen-ant-mantel") ; print(t1)
    t1 <- procuste.rtest(pcoscaled(gen), pcoscaled(ant), 99)
    plot(t1, main = "gen-ant-procuste") ; print(t1)
    t1 <- RV.rtest(pcoscaled(gen), pcoscaled(ant), 99)
    plot(t1, main = "gen-ant-RV") ; print(t1)

Documentation reproduced from package ade4, version 1.5-2. License: GPL (>= 2)