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Reference index for {aroma.affymetrix}

You are viewing package members beginning with the letter "A"

Function/ClassDescription
AffymetrixPgfFile.findByChipType {aroma.affymetrix}Locates a PGF file from its chip type
AffymetrixPgfFile.findByChipType {aroma.affymetrix}Locates a PGF file from its chip type
AffymetrixPgfFile.fromFile {aroma.affymetrix}Defines an AffymetrixPgfFile object from a PGF file
AffymetrixPgfFile.fromFile {aroma.affymetrix}Defines an AffymetrixPgfFile object from a PGF file
AffymetrixPgfFile.getHeader {aroma.affymetrix}Gets the header of the PGF file
AffymetrixPgfFile.getUnitNames {aroma.affymetrix}Gets the names of each unit
AffymetrixProbeTabFile {aroma.affymetrix}The AffymetrixProbeTabFile class
AlleleSummation {aroma.affymetrix}The AlleleSummation class
AlleleSummation.getChipEffectSet {aroma.affymetrix}Gets the set of chip effects for this model
AllelicCrosstalkCalibration {aroma.affymetrix}The AllelicCrosstalkCalibration class
AllelicCrosstalkCalibration.process {aroma.affymetrix}Calibrates the data set
allocateFromCdf.AffymetrixCelFile {aroma.affymetrix}Creates an empty CEL file from a template CDF
allocateFromCdf.AffymetrixCelFile {aroma.affymetrix}Creates an empty CEL file from a template CDF
allocateFromCdf.AromaUnitTabularBinaryFile {aroma.affymetrix}Creates an AromaUnitTabularBinaryFile mapping to a given CDF
allocateFromCdf.AromaUnitTabularBinaryFile {aroma.affymetrix}Creates an AromaUnitTabularBinaryFile mapping to a given CDF
aroma.affymetrix {aroma.affymetrix}Package aroma.affymetrix
AromaChipTypeAnnotationFile {aroma.affymetrix}The AromaChipTypeAnnotationFile class
AromaChipTypeAnnotationFile.byChipType {aroma.affymetrix}Defines an AromaChipTypeAnnotationFile object by chip type
AromaChipTypeAnnotationFile.byChipType {aroma.affymetrix}Defines an AromaChipTypeAnnotationFile object by chip type
AromaChipTypeAnnotationFile.findByChipType {aroma.affymetrix}Locates an annotation file by its chip type