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Reference index for {aroma.affymetrix}

You are viewing package members beginning with the letter "B"

Function/ClassDescription
BackgroundCorrection {aroma.affymetrix}The BackgroundCorrection class
BackgroundCorrection.process {aroma.affymetrix}Processes the data set
BaseCountNormalization {aroma.affymetrix}The BaseCountNormalization class
BasePositionNormalization {aroma.affymetrix}The BasePositionNormalization class
bgAdjustGcrma {aroma.affymetrix}Non-documented objects
bgAdjustGcrma.AffymetrixCelFile {aroma.affymetrix}Applies probe sequence based background correction to a CEL file
bgAdjustGcrma.AffymetrixCelSet {aroma.affymetrix}Applies probe sequence based background correction to a set of CEL files
bgAdjustOptical.AffymetrixCelFile {aroma.affymetrix}Applies optical background correction to a CEL file
bgAdjustOptical.AffymetrixCelSet {aroma.affymetrix}Applies optical background correction to a set of CEL files
bgAdjustRma.AffymetrixCelFile {aroma.affymetrix}Applies normExp background correction to a CEL file
bgAdjustRma.AffymetrixCelSet {aroma.affymetrix}Applies RMA background correction to a set of CEL files
bpmapCluster2Cdf {aroma.affymetrix}Creates a CDF from tiling-array BPMAP file
byChipType.AromaChipTypeAnnotationFile {aroma.affymetrix}Defines an AromaChipTypeAnnotationFile object by chip type
byChipType.AromaChipTypeAnnotationFile {aroma.affymetrix}Defines an AromaChipTypeAnnotationFile object by chip type
byChipType.DChipGenomeInformation {aroma.affymetrix}Defines a DChipGenomeInformation object by chip type
byChipType.DChipSnpInformation {aroma.affymetrix}Defines a DChipSnpInformation object by chip type
byChipType.GenomeInformation {aroma.affymetrix}Static method to define a genome information set by chip type
byChipType.GenomeInformation {aroma.affymetrix}Static method to define a genome information set by chip type
byChipType.SnpInformation {aroma.affymetrix}Static method to define a genome information set by chip type
byChipType.UgpGenomeInformation {aroma.affymetrix}Defines a UgpGenomeInformation object by chip type