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Reference index for {aroma.affymetrix}

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Function/ClassDescription
nbrOfArrays.AffymetrixAptSummaryFile {aroma.affymetrix}Non-documented objects
nbrOfArrays.AffymetrixCelSet {aroma.affymetrix}Gets the number of arrays in the file set
nbrOfArrays.AffymetrixCnChpSet {aroma.affymetrix}Gets the number of arrays in the file set
nbrOfArrays.CnagCfhSet {aroma.affymetrix}Gets the number of arrays in the file set
nbrOfArrays.DChipDcpSet {aroma.affymetrix}Gets the number of arrays in the file set
nbrOfGroupsPerUnit.AffymetrixCdfFile {aroma.affymetrix}Gets the number of groups in each unit
nbrOfSnps.AffymetrixCdfFile {aroma.affymetrix}Gets the number of SNPs
normalizeQuantile.AffymetrixCelFile {aroma.affymetrix}Normalizes the probe intensities to a target empirical distribution
normalizeQuantile.AffymetrixCelSet {aroma.affymetrix}Normalizes samples to have the same empirical distribution
NormExpBackgroundCorrection {aroma.affymetrix}The NormExpBackgroundCorrection class