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Reference index for {aroma.affymetrix}

You are viewing package members beginning with the letter "R"

Function/ClassDescription
range.AffymetrixCelFile {aroma.affymetrix}Non-documented objects
readCdfDataFrame {aroma.affymetrix}Reads units (probesets) from an Affymetrix CDF file
readRawData.AffymetrixCelFile {aroma.affymetrix}Gets all or a subset of the fields in a CEL file
readUnits.AffymetrixCdfFile {aroma.affymetrix}Reads CDF data unit by unit
readUnits.AffymetrixCelFile {aroma.affymetrix}Reads CEL data unit by unit
readUnits.CnagCfhFile {aroma.affymetrix}Reads CEL data unit by unit
readUnits.MultiArrayUnitModel {aroma.affymetrix}Reads data unit by unit
readUnits.SingleArrayUnitModel {aroma.affymetrix}Reads data unit by unit
readUnitsByQuartets.AffymetrixCdfFile {aroma.affymetrix}Gets the cell quartets for each base position
ReseqCrosstalkCalibration {aroma.affymetrix}The ReseqCrosstalkCalibration class
ReseqCrosstalkCalibration.process {aroma.affymetrix}Calibrates the data set
ResidualFile {aroma.affymetrix}The ResidualFile class
ResidualFile.getCellIndices {aroma.affymetrix}Retrieves tree list of cell indices for a set of units
ResidualSet {aroma.affymetrix}The ResidualSet class
RmaBackgroundCorrection {aroma.affymetrix}The RmaBackgroundCorrection class
RmaBackgroundCorrection.process {aroma.affymetrix}Performs background correction
RmaCnPlm {aroma.affymetrix}The RmaCnPlm class
RmaPlm {aroma.affymetrix}The RmaPlm class
RmaPlm.getFitUnitGroupFunction {aroma.affymetrix}Gets the low-level function that fits the PLM
RmaSnpPlm {aroma.affymetrix}The RmaSnpPlm class