multiple ggplot2 in 1 data frame
df
primer timepoints mean sde Acan 0 1.000000e+00 0.000000e+00 Acan 20 9.547922e-01 1.729115e-01 Acan 40 1.936454e+00 9.934593e-01 Acan 60 1.261360e+00 2.232165e-01 Acan 120 2.219807e+00 5.915425e-01 Acan 240 2.540490e+00 5.651534e-01 Acan 360 1.518923e+00 1.522455e-01 Actb 0 1.000000e+00 0.000000e+00 Actb 20 1.061931e+00 4.362860e-02 Actb 40 8.835103e-01 1.196449e-01 Actb 60 8.889279e-01 1.401378e-01 Actb 120 1.001135e+00 7.770563e-02 Actb 240 8.551348e-01 1.884853e-01 Actb 360 7.343955e-01 1.824412e-01
This treats the data like each primer is in 1 df, but I want to make a scatter plot using ggplot2 for each unique primer (the y axis would be column mean and the x axis would be timepoints), could I get lapply to work here?
If I could just lapply a function somehow that would be ideal, a list of plots.
Here's the code I've been using for ggplot, in my attempts to loop this
plot_gg <- function(x){ ggplot(df,aes(x=timepoints,mean)) + geom_point() + geom_line() + scale_x_continuous(name='x axis') + scale_y_continuous(name='y axis') + geom_errorbar(aes(ymin=mean-sde,ymax=mean+sde),width=2) + opts(title = primer) } desired_list <- lapply(unique(df$primer),plot_gg,df)
this is pretty wrong, but, I'm not sure if I should subset the df first according to each individual primer. or if it would be easier to do w/ ggplot in the structure the data is in
if you could help direct me a little bit that would be great
