Understanding dates and plotting a histogram with ggplot2 in R
I'm having issues with understanding why the handling of dates, labels and breaks is not working as I would have expected in R when trying to make a histogram with ggplot2.
I'm looking for:
- A histogram of the frequency of my dates
- Tick marks centered under the matching bars
- Date labels in
- Appropriate limits; minimized empty space between edge of grid space and outermost bars
I've uploaded my data to pastebin to make this reproducible. I've created several columns as I wasn't sure the best way to do this:
Here's what I tried:
ggplot(dates, aes(x=converted)) + geom_histogram() + scale_x_date(labels=date_format("%Y-%b"), + breaks = "1 month") + opts(axis.text.x = theme_text(angle=90)) stat_bin: binwidth defaulted to range/30. Use 'binwidth = x' to adjust this.
That gives me this graph
- Correct x axis label format
- The frequency distribution has changed shape (binwidth issue?)
- Tick marks don't appear centered under bars
- The xlims have changed as well
I worked through the example in the ggplot2 documentation at the
scale_x_date section and
geom_line() appears to break, label, and center ticks correctly when I use it with my same x-axis data. I don't understand why the histogram is different.
Updates based on answers from edgester and gauden
I initially thought gauden's answer helped me solve my problem, but am now puzzled after looking more closely. Note the differences between the two answers' resulting graphs after the code.
Assume for both:
Based on @edgester's answer below, I was able to do the following:
freqs <- aggregate(dates$Date, by=list(dates$Date), FUN=length) freqs$names <- as.Date(freqs$Group.1, format="%Y-%m-%d") ggplot(freqs, aes(x=names, y=x)) + geom_bar(stat="identity") + scale_x_date(breaks="1 month", labels=date_format("%Y-%b"), limits=c(as.Date("2008-04-30"),as.Date("2012-04-01"))) + ylab("Frequency") + xlab("Year and Month") + theme_bw() + opts(axis.text.x = theme_text(angle=90))
Here is my attempt based on gauden's answer:
dates$Date <- as.Date(dates$Date) ggplot(dates, aes(x=Date)) + geom_histogram(binwidth=30, colour="white") + scale_x_date(labels = date_format("%Y-%b"), breaks = seq(min(dates$Date)-5, max(dates$Date)+5, 30), limits = c(as.Date("2008-05-01"), as.Date("2012-04-01"))) + ylab("Frequency") + xlab("Year and Month") + theme_bw() + opts(axis.text.x = theme_text(angle=90))
Plot based on edgester's approach:
Plot based on gauden's approach:
Note the following:
- gaps in gauden's plot for 2009-Dec and 2010-Mar;
table(dates$Date)reveals that there are 19 instances of
2009-12-01and 26 instances of
2010-03-01in the data
- edgester's plot starts at 2008-Apr and ends at 2012-May. This is correct based on a minimum value in the data of 2008-04-01 and a max date of 2012-05-01. For some reason gauden's plot starts in 2008-Mar and still somehow manages to end at 2012-May. After counting bins and reading along the month labels, for the life of me I can't figure out which plot has an extra or is missing a bin of the histogram!
Any thoughts on the differences here? edgester's method of creating a separate count
As an aside, here are other locations that have information about dates and ggplot2 for passers-by looking for help:
- Started here at learnr.wordpress, a popular R blog. It stated that I needed to get my data into POSIXct format, which I now think is false and wasted my time.
- Another learnr post recreates a time series in ggplot2, but wasn't really applicable to my situation.
- r-bloggers has a post on this, but it appears outdated. The simple
format=option did not work for me.
- This SO question is playing with breaks and labels. I tried treating my
Datevector as continuous and don't think it worked so well. It looked like it was overlaying the same label text over and over so the letters looked kind of odd. The distribution is sort of correct but there are odd breaks. My attempt based on the accepted answer was like so (result here).